Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1539292	1539336	45	3 [0]	[1] 2	BW25113_RS07710	leucine‑rich repeat domain‑containing protein

GGATAGATCCAGCAGTAAGAGTTCATTTTTATTACCTGCAACAATATCAGTTAATTGATTATGGCTGAGATTCAGGTATTGCAGCCATTCGCAAGATTCTAATTGCACAAACTCTAGTTGATTA  >  NZ_CP009273/1539303‑1539426                                   |                                                                                          ggATAGATCCAGCAGTAAGAGTTCATTTTTATTACCTGCAACAATATCAGTTAATTGATTATGGCTGAGATTCAGGTATTGCAGCCATTc                                    >  2:176440/1‑90 (MQ=255)                                   ccTGCAACAATATCAGTTAATTGATTATGGCTGAGATTCAGGTATTGCAGCCATTCGCAAGATTCTAATTGCACAAACTCTAGTTGATTa  <  2:250754/90‑1 (MQ=255)                                   |                                                                                          GGATAGATCCAGCAGTAAGAGTTCATTTTTATTACCTGCAACAATATCAGTTAATTGATTATGGCTGAGATTCAGGTATTGCAGCCATTCGCAAGATTCTAATTGCACAAACTCTAGTTGATTA  >  NZ_CP009273/1539303‑1539426

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑