Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	42270	42287	18	2 [1]	[1] 3	caiT/fixA	L‑carnitine/gamma‑butyrobetaine antiporter/electron transfer flavoprotein FixA

TCTGCGTGTGACATTTTCAATATTGGTGATTAAAGTTTTATTTCAAAATTAAAGGGCGTGATATCTGTAATTAACACCACCGATATGAAC  >  NZ_CP009273/42283‑42372      |                                                                                     tCTGCGTGTGACATTTTCAATATTGGTGATTAAAGTTTTATTTCAAAATTAAAGGGCGTGATATCTGTAATTAACACCACCGATATGAac  <  2:62486/90‑1 (MQ=255)      gtgtGACATTTTCAATATTGGTGATTAAAGTTTTATTTCAAAATTAAAGGGCGTGATATCTGTAATTa                   <  1:322088/68‑1 (MQ=255)      gtgtGACATTTTCAATATTGGTGATTAAAGTTTTATTTCAAAATTAAAGGGCGTGATATCTGTAATTa                   >  2:322088/1‑68 (MQ=255)      |                                                                                     TCTGCGTGTGACATTTTCAATATTGGTGATTAAAGTTTTATTTCAAAATTAAAGGGCGTGATATCTGTAATTAACACCACCGATATGAAC  >  NZ_CP009273/42283‑42372

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑