Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1225849	1225988	140	2 [1]	[1] 2	[hlyE]	[hlyE]

GCGGGATGCGTCAATGTCTTTATTTCTATTAATATGATAAATATCAAACAATGTTTAATGTCATTATGGCGAATGCTTCTATTCTATTTTTTAGCCGGGTGATATTTTTCATTTCTGCTGGATGAGCGTCGTCGC  >  NZ_CP009273/1225944‑1226078                                              |                                                                                          gcgggATGCGTCAATGTCTTTATTTCTATTAATATGATAAATATCAAACAATGTTTAATGTCATTATGGCGAATGCTTCTATTCTAtttt                                               >  1:88222/1‑90 (MQ=255)                                              aaaCAATGTTTAATGTCATTATGGCGAATGCTTCTATTCTATTTTTTAGCCGGGTGATATTTTTCATTTCTGCTGGATGAGCGTCGTCGc  >  1:209827/1‑90 (MQ=255)                                              |                                                                                          GCGGGATGCGTCAATGTCTTTATTTCTATTAATATGATAAATATCAAACAATGTTTAATGTCATTATGGCGAATGCTTCTATTCTATTTTTTAGCCGGGTGATATTTTTCATTTCTGCTGGATGAGCGTCGTCGC  >  NZ_CP009273/1225944‑1226078

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑