Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1539740	1539745	6	2 [0]	[0] 5	BW25113_RS07710	leucine‑rich repeat domain‑containing protein

GGTCACTTCATTAGTGTCATCAATTATATTTCTTACTGCAGTCC  >  NZ_CP009273/1539696‑1539739                                            | ggTCACTTCATTAGTGTCATCAATTATATTTCTTACTGCAGTcc  <  1:237557/44‑1 (MQ=255) ggTCACTTCATTAGTGTCATCAATTATATTTCTTACTGCAGTcc  >  2:237557/1‑44 (MQ=255)                                            | GGTCACTTCATTAGTGTCATCAATTATATTTCTTACTGCAGTCC  >  NZ_CP009273/1539696‑1539739

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑