Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1705057	1705080	24	2 [1]	[1] 2	rsxG	electron transport complex subunit RsxG

GTTCACCGGCGCGACGATTACTCCCCGCGCGGTGGTTAATGCGGTAAAACGCGCCGGATTGTACGCTCAGACGTTACCGGCACAACTTTCTCA  >  NZ_CP009273/1704967‑1705059                                                                                          |    gTTCACCGGCGCGACGATTACTCCCCGCGCGGTGGTTAATGCGGTAAAACGCGCCGGATTGTACGCTCAGACGTTACCGGCACAACTTtc     >  2:178301/1‑90 (MQ=255)    cACCGGCGCGACGATTACTCCCCGCGCGGTGGTTAATGCGGTAAAACGCGCCGGATTGTACGCTCAGACGTTACCGGCACAACTTTCTCa  <  2:112723/90‑1 (MQ=255)                                                                                          |    GTTCACCGGCGCGACGATTACTCCCCGCGCGGTGGTTAATGCGGTAAAACGCGCCGGATTGTACGCTCAGACGTTACCGGCACAACTTTCTCA  >  NZ_CP009273/1704967‑1705059

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑