Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	2189479	2189530	52	2 [0]	[1] 2	metG	methionine‑‑tRNA ligase

TAAAAGCCGCTGCCGCGCCGGTAACTGGCCCGCTGGCAGATGATCCGAT  >  NZ_CP009273/2189430‑2189478                                                 | tAAAAGCCGCTGCCGCGCCGGTAACTGGCCCGCTGGCAGATGATCCGAt  <  1:229110/49‑1 (MQ=255) tAAAAGCCGCTGCCGCGCCGGTAACTGGCCCGCTGGCAGATGATCCGAt  >  2:229110/1‑49 (MQ=255)                                                 | TAAAAGCCGCTGCCGCGCCGGTAACTGGCCCGCTGGCAGATGATCCGAT  >  NZ_CP009273/2189430‑2189478

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑