Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	2463695	2463839	145	2 [0]	[0] 2	BW25113_RS12270	hypothetical protein

ATTACTAACATAAAAGACAATATATTTAAAAACATTAGATTTATATC  >  NZ_CP009273/2463648‑2463694                                               | aTTACTAACATAAAAGACAATATATTTAAAAACATTAGATTTATATc  >  1:335197/1‑47 (MQ=255) aTTACTAACATAAAAGACAATATATTTAAAAACATTAGATTTATATc  <  2:335197/47‑1 (MQ=255)                                               | ATTACTAACATAAAAGACAATATATTTAAAAACATTAGATTTATATC  >  NZ_CP009273/2463648‑2463694

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑