Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	2986852	2986877	26	2 [1]	[1] 2	ygeH/BW25113_RS14840	HilA family transcriptional regulator YgeH/hypothetical protein

AAAGCCATCGAGTTATAATTGACAACATTTTGAAATTAAAGCAGCTGACGAGAATTTGTATGCGATAAATTTTTATTGACGCAATTTTATTATTTAGA  >  NZ_CP009273/2986762‑2986859                                                                                          |         aaaGCCATCGAGTTATAATTGACAACATTTTGAAATTAAAGCAGCTGACGAGAATTTGTATGCGATAAATTTTTATTGACGCAATTttat          <  2:287489/90‑1 (MQ=255)         cGAGTTATAATTGACAACATTTTGAAATTAAAGCAGCTGACGAGAATTTGTATGCGATAAATTTTTATTGACGCAATTTTATTATTTAGa  <  1:52116/90‑1 (MQ=255)                                                                                          |         AAAGCCATCGAGTTATAATTGACAACATTTTGAAATTAAAGCAGCTGACGAGAATTTGTATGCGATAAATTTTTATTGACGCAATTTTATTATTTAGA  >  NZ_CP009273/2986762‑2986859

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑