Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	2136613	2136717	105	2 [1]	[1] 2	udk/dgcE	uridine kinase/diguanylate cyclase

TACTGGCGACCAGGTCTTGCGGATAAAGCGGTAATGAGCAAACAATCACAGCATGTATTAATTGCCCTGCCCCACCCGCTGCTTCACCTGGTCA  >  NZ_CP009273/2136714‑2136807     |                                                                                          tACTGGCGACCAGGTCTTGCGGATAAAGCGGTAATGAGCAAACAATCACAGCATGTATTAATTGCCCTGCCCCACCCGCTGCTTCACCTg      >  1:231179/1‑90 (MQ=255)     ggCGACCAGGTCTTGCGGATAAAGCGGTAATGAGCAAACAATCACAGCATGTATTAATTGCCCTGCCCCACCCGCTGCTTCACCTGGTCa  >  2:130970/1‑90 (MQ=255)     |                                                                                          TACTGGCGACCAGGTCTTGCGGATAAAGCGGTAATGAGCAAACAATCACAGCATGTATTAATTGCCCTGCCCCACCCGCTGCTTCACCTGGTCA  >  NZ_CP009273/2136714‑2136807

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑