Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	3798103	3798132	30	2 [1]	[0] 5	rfaS	LPS core biosynthesis protein RfaS

ATATCGAAATAATTCGCGTTATCAAGAATAAAATCTTCGCCAACAGTATTTCTTAGAAGCAAAACTTTATGACAGTTAATATTTTTTAAT  >  NZ_CP009273/3798133‑3798222 |                                                                                          atatCGAAATAATTCGCGTTATCAAGAATAAAATCTTCGCCAACAGTATTTCTTAGAAGCaaa                             <  1:246843/63‑1 (MQ=255) atatCGAAATAATTCGCGTTATCAAGAATAAAATCTTCGCCAACAGTATTTCTTAGAAGCaaa                             >  2:246843/1‑63 (MQ=255) atatCGAAATAATTCGCGTTATCAAGAATAAAATCTTCGCCAACAGTATTTCTTAGAAGCAAAACTTTATGAc                   >  1:29326/1‑73 (MQ=255) atatCGAAATAATTCGCGTTATCAAGAATAAAATCTTCGCCAACAGTATTTCTTAGAAGCAAAACTTTATGAc                   <  2:29326/73‑1 (MQ=255) atatCGAAATAATTCGCGTTATCAAGAATAAAATCTTCGCCAACAGTATTTCTTAGAAGCAAAACTTTATGACAGTTAATATTTTTTAat  >  2:180832/1‑90 (MQ=255) |                                                                                          ATATCGAAATAATTCGCGTTATCAAGAATAAAATCTTCGCCAACAGTATTTCTTAGAAGCAAAACTTTATGACAGTTAATATTTTTTAAT  >  NZ_CP009273/3798133‑3798222

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑