| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NZ_CP009273 | 4569286 = | 35 (1.130) | 4 (0.140) | 4/152 | 1.9 | 11.3% | intergenic (‑132/+30) | mcrB/symE | 5‑methylcytosine‑specific restriction endonuclease subunit McrB/endoribonuclease SymE |
| ? | NZ_CP009273 | 4569307 = | 31 (1.100) | intergenic (‑153/+9) | mcrB/symE | 5‑methylcytosine‑specific restriction endonuclease subunit McrB/endoribonuclease SymE | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
GCAACGTACTGAAACAATAGATTTTTACTGCAAAATCAGACTGGTAAATATTTACTGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTACGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTT > NZ_CP009273/4569197‑4569370 | tgtgcaaactgtcggcgcgtaaacaaaagcaggtgcaggcgtttattggagtgattgccggtaaacagaaagtcgcgtaacagcgtttac < 1:359314‑M1/1‑1 (MQ=255) tgcaaactgtcggcgcgtaaacaaaagcaggtgcaggcgtttattggagtgattgccggtaaacagaaagtcgcgtaacagcgtttaCTc < 1:787707‑M1/3‑1 (MQ=255) tgcaaactgtcggcgcgtaaacaaaagcaggtgcaggcgtttattggagtgattgccggtaaacagaaagtcgcgtaacagcgtttaCTc > 2:226214‑M1/88‑90 (MQ=255) gcaaactgtcggcgcgtaaacaaaagcaggtgcaggcgtttattggagtgattgccggtaaacagaaagtcgcgtaacagcgtttaCTcc < 2:148756‑M1/4‑1 (MQ=255) cGTACTGAAACAATAGATTTTTACTGCAAAATCAGACTGGTAAATATTTACTGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTccc < 1:699964/90‑1 (MQ=255) actgtcggcgcgtaaacaaaagcaggtgcaggcgtttattggagtgattgccggtaaacagaaagtcgcgtaacagcgtttaCTCCCggt < 2:8353‑M1/8‑1 (MQ=255) aCAATAGATTTTTACTGCAAAATCAGACTGGTAAATATTTACTGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTaa > 1:351539/1‑90 (MQ=255) aaTAGATTTTTACTGCAAAATCAGACTGGTAAATATTTACTGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAAcc > 2:591397/1‑90 (MQ=255) aaTAGATTTTTACTGCAAAATCAGACTGGTAAATATTTACTGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAAcc < 1:11783/90‑1 (MQ=255) aaTAGATTTTTACTGCAAAATCAGACTGGTAAATATTTACTGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAAcc > 1:700306/1‑90 (MQ=255) aTAGATTTTTACTGCAAAATCAGACTGGTAAATATTTACTGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCg > 1:536855/1‑90 (MQ=255) gATTTTTACTGCAAAATCAGACTGGTAAATATTTACTGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGa < 1:546211/90‑1 (MQ=255) ttttACTGCAAAATCAGACTGGTAAATATTTACTGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTa < 2:67131/90‑1 (MQ=255) ttACTGCAAAATCAGACTGGTAAATATTTACTGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCg < 2:270472/82‑1 (MQ=255) ttACTGCAAAATCAGACTGGTAAATATTTACTGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCg > 1:270472/1‑82 (MQ=255) aCTGCAAAATCAGACTGGTAAATATTTACTGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACg < 2:119342/90‑1 (MQ=255) agcaggtgcaggcgtttattggagtgattgccggtaaacagaaagtcgcgtaacagcgtttaCTccc < 2:133272‑M1/5‑1 (MQ=255) agcaggtgcaggcgtttattggagtgattgccggtaaacagaaagtcgcgtaacagcgtttaCTccc > 1:133272‑M1/63‑67 (MQ=255) ggTAAATATTTACTGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCggtg > 2:857885/1‑56 (MQ=255) ggTAAATATTTACTGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCggtg < 1:857885/56‑1 (MQ=255) ggTAAATATTTACTGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTACGCGACTTTc < 1:413268/90‑1 (MQ=255) atatTTACTGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTACGCGACTTTCTGttt < 1:304494/90‑1 (MQ=255) tatTTACTGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTACGCGACTTTCTGTTTa > 1:519312/1‑90 (MQ=255) tACTGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTACGCGACTTTCTGTTTACCgg > 2:680356/1‑90 (MQ=255) tACTGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTACGCGACTTTCTGTTTACCgg > 1:98774/1‑90 (MQ=255) tGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTACGCGACTTTCTGTTTACCGGCaa < 2:524973/90‑1 (MQ=255) gAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTACGCGACTTTCTGTTTACCGGCAAt < 2:581323/90‑1 (MQ=255) aGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTACGCGACTTTCTGTTTACCGGCAATc > 1:499961/1‑90 (MQ=255) aGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTACGCGACTTTCTGTTTACCGGCAATc < 1:4798/90‑1 (MQ=255) aGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTACGCGACTTTCTGTTTACCGGCAATc > 2:414217/1‑90 (MQ=255) gggggAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTACGCGACTTTCTGTTTACCGGCAATCa > 2:549092/1‑90 (MQ=255) ggggAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTACGCGACTTTCTGTTTACCGGCAATCAc < 2:700306/90‑1 (MQ=255) gggAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTACGCGACTTTCTGTTTACCGGCAATCACt < 1:705014/90‑1 (MQ=255) gAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTACGCGACTTTCTGTTTACCGGCAATCACTcc < 2:536855/90‑1 (MQ=255) aaGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTACGCGACTTTCTGTTTACCGGCAATCACTCCaa > 1:582022/1‑90 (MQ=255) gaaagtcgcgtaacagcgtttaCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTACGCGACTTTCTGTTTACCGGCAATCACTCCAATaa < 1:797164‑M1/68‑1 (MQ=255) gaaagtcgcgtaacagcgtttaCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTACGCGACTTTCTGTTTACCGGCAATCACTCCAATaa > 2:797164‑M1/23‑90 (MQ=255) ttCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTACGCGACTTTCTGTTTACCGGCAATCACTCCAATaaa > 2:803757/1‑90 (MQ=255) gcgtaacagcgtttaCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTACGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTg < 1:529457‑M1/75‑1 (MQ=255) aGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTACGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCa > 1:135422/1‑90 (MQ=255) gTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTACGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCAc < 1:725728/90‑1 (MQ=255) tCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTACGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCAcc < 1:648308/90‑1 (MQ=255) aGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTACGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTg > 1:515486/1‑90 (MQ=255) gTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTACGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGc > 2:140785/1‑90 (MQ=255) tGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTACGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCt < 1:494689/90‑1 (MQ=255) gtttaCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTACGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCttt < 1:335216‑M1/85‑1 (MQ=255) | GCAACGTACTGAAACAATAGATTTTTACTGCAAAATCAGACTGGTAAATATTTACTGAGGGGGAAAGTTTCTATTGAGTCAGTGGAAGGCTCCCGGTGGTTAACCGGGAGTAAACGCTGTTACGCGACTTTCTGTTTACCGGCAATCACTCCAATAAACGCCTGCACCTGCTTT > NZ_CP009273/4569197‑4569370 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |