Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1098624	1098632	9	2 [0]	[1] 3	csgD	biofilm master transcriptional regulator CsgD

CTGCAAGAGAGCTGTCGCCTGCAAAGAAGATTTAGTGATCAACAATAATGTATGA  >  NZ_CP009273/1098569‑1098623                                                       | ctgcAAGAGAGCTGTCGCCTGCAAAGAAGATTTAGTGATCAACAATAATGTATGa  <  1:187424/55‑1 (MQ=255) ctgcAAGAGAGCTGTCGCCTGCAAAGAAGATTTAGTGATCAACAATAATGTATGa  >  2:187424/1‑55 (MQ=255)                                                       | CTGCAAGAGAGCTGTCGCCTGCAAAGAAGATTTAGTGATCAACAATAATGTATGA  >  NZ_CP009273/1098569‑1098623

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑