Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	2779644	2779670	27	2 [0]	[1] 2	BW25113_RS13825/BW25113_RS26005	tRNA‑Ile/alpha‑amylase family glycosyl hydrolase

TTAGTTTCGTATGAGCGATTTTTGACAGTTGCCTCTCCAGACCACATCGATAATTAATAAAACAGATTTAAGCATTATCCTTTTCC  >  NZ_CP009273/2779558‑2779643                                                                                      | ttAGTTTCGTATGAGCGATTTTTGACAGTTGCCTCTCCAGACCACATCGATAATTAATAAAACAGATTTAAGCATTATCCTTTTcc  >  1:74490/1‑86 (MQ=255) ttAGTTTCGTATGAGCGATTTTTGACAGTTGCCTCTCCAGACCACATCGATAATTAATAAAACAGATTTAAGCATTATCCTTTTcc  <  2:74490/86‑1 (MQ=255)                                                                                      | TTAGTTTCGTATGAGCGATTTTTGACAGTTGCCTCTCCAGACCACATCGATAATTAATAAAACAGATTTAAGCATTATCCTTTTCC  >  NZ_CP009273/2779558‑2779643

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑