Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	2782042	2782065	24	4 [1]	[0] 2	BW25113_RS26005/csiD	alpha‑amylase family glycosyl hydrolase/glutarate dioxygenase GlaH

CGTAGCGCTCTTCTTTTAGGGAAAACAGGAGAACCGCCGAACTATCTCTATTTATAATTTAATGTTATATCTGCCCCGATAAAACGGGGCAGATAATATGTTTAGTTTACTA  >  NZ_CP009273/2781952‑2782063                                                                                          |                       cGTAGCGCTCTTCTTTTAGGAAAAACAGGAAAACCGCCGAACTATCTCTATTTATAATTTAATGTTATATCTGCCCCGATAAAACGGGGc                        <  1:657212/90‑1 (MQ=255)                       aaaCAGGAGAACCGCCGAACTATCTCTATTTATAATTTAATGTTATATCTGCCCCGATAAAACGGGGCAGATAATATGTTTAGTTTACTa  <  2:161861/90‑1 (MQ=255)                                                      ataATTTAATGTTATATCTGCCCCGATAAAACGGGGc                        <  1:352316/37‑1 (MQ=255)                                                      ataATTTAATGTTATATCTGCCCCGATAAAACGGGGc                        >  2:352316/1‑37 (MQ=255)                                                                                          |                       CGTAGCGCTCTTCTTTTAGGGAAAACAGGAGAACCGCCGAACTATCTCTATTTATAATTTAATGTTATATCTGCCCCGATAAAACGGGGCAGATAATATGTTTAGTTTACTA  >  NZ_CP009273/2781952‑2782063

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑