Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	578986	579017	32	2 [0]	[0] 2	BW25113_RS26085/appY	tail fiber assembly protein/DNA‑binding transcriptional activator AppY

TGCAAACTATAATTTTGTGTATAAAAATATAAATGCACATCATCC  >  NZ_CP009273/579018‑579062 |                                             tGCAAACTATAATTTTGTGTATAAAAATATAAATGCACATCATcc  >  1:58419/1‑45 (MQ=255) tGCAAACTATAATTTTGTGTATAAAAATATAAATGCACATCATcc  <  2:58419/45‑1 (MQ=255) |                                             TGCAAACTATAATTTTGTGTATAAAAATATAAATGCACATCATCC  >  NZ_CP009273/579018‑579062

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑