Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1362258	1362268	11	2 [1]	[0] 2	pspF/pspA	phage shock protein operon transcriptional activator/phage shock protein PspA

TGGCACGCAAATTGTATTAACAGTTCAGCAGGACAATCCTGAACGCAGAAATCAAGAGGACAACATTATGGGTATTTTTTCTCGCTTTGC  >  NZ_CP009273/1362269‑1362358 |                                                                                          tGGCACGCAAATTGTATTAACAGTTCAGCAGGACAATCCTGAACGCAGAAATCAAGAGGACAACATTATGGGTATTTTTTCTCGCtttcc  >  2:654260/1‑88 (MQ=255) tGGCACGCAAATTGTATTAACAGTTCAGCAGGACAATCCTGAACGCAGAAATCAAGAGGACAACATTATGGGTATTTTTTCTCGCTTTGc  >  2:274180/1‑90 (MQ=255) |                                                                                          TGGCACGCAAATTGTATTAACAGTTCAGCAGGACAATCCTGAACGCAGAAATCAAGAGGACAACATTATGGGTATTTTTTCTCGCTTTGC  >  NZ_CP009273/1362269‑1362358

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑