Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	826565	826575	11	3 [0]	[0] 3	rhlE	ATP‑dependent RNA helicase RhlE

GGCAAAACAGCGGGCTTTACGCTGCCGCTGTTGCAACACCTGATCACTCGCCAGCCGCACGCCAAAGGGCGTCGTCCGGTACGTGCGCTC  >  NZ_CP009273/826475‑826564                                                                                          | ggcaAAACAGCGGGCTTTACGCTGCCGCTGTTGCAACACCTGATCACTCGCCAGCCGCACGCCAAAGGGCGTCGTCCGGTACGTGCGCTc  <  2:100952/90‑1 (MQ=255)                                                 cGCCAGCCGCACGCCAAAGGGCGTCGTCCGGTACGTGCGCTc  <  1:79300/42‑1 (MQ=255)                                                 cGCCAGCCGCACGCCAAAGGGCGTCGTCCGGTACGTGCGCTc  >  2:79300/1‑42 (MQ=255)                                                                                          | GGCAAAACAGCGGGCTTTACGCTGCCGCTGTTGCAACACCTGATCACTCGCCAGCCGCACGCCAAAGGGCGTCGTCCGGTACGTGCGCTC  >  NZ_CP009273/826475‑826564

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑