Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	995499	995520	22	2 [0]	[1] 2	elfC	fimbrial biogenesis usher protein

GCAGGCGATTTTTTCGATAGTGTCAGCTTTCGTGGTGTGCAGCTGGCGTCAGATGACAACAT  >  NZ_CP009273/995437‑995498                                                              | gCAGGCGATTTTTTCGATAGTGTCAGCTTTCGTGGTGTGCAGCTGGCGTCAGATGACAACAt  >  1:248608/1‑62 (MQ=255) gCAGGCGATTTTTTCGATAGTGTCAGCTTTCGTGGTGTGCAGCTGGCGTCAGATGACAACAt  <  2:248608/62‑1 (MQ=255)                                                              | GCAGGCGATTTTTTCGATAGTGTCAGCTTTCGTGGTGTGCAGCTGGCGTCAGATGACAACAT  >  NZ_CP009273/995437‑995498

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑