Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1067069	1067106	38	2 [1]	[0] 4	rutD	pyrimidine utilization protein D

ATGCTCAATCCCTGCGGCTACCAGCGCCTGATGCAGTTCCGCTGCCATCTGGGCGATACTGTAATCTTCTGCCAGCGTGTCGGGATTATTGCCGGTG  >  NZ_CP009273/1066979‑1067075                                                                                          |        aTGCTCAATCCCTGCGGCTACCAGCGCCTGATGCAGTTCCGCTGCCATCTGGGCGATACTGTAATCTTCTGCCAGCGTGTCGGGattatt         >  1:248512/1‑90 (MQ=255)        aTCCCTGCGGCTACCAGCGCCTGATGCAGTTCCGCTGCCATCTGGGCGATACTGTAATCTTCTGCCAGCGTGTCGGGATTATTGCCGGTg  >  2:164223/1‑90 (MQ=255)                                                                                          |        ATGCTCAATCCCTGCGGCTACCAGCGCCTGATGCAGTTCCGCTGCCATCTGGGCGATACTGTAATCTTCTGCCAGCGTGTCGGGATTATTGCCGGTG  >  NZ_CP009273/1066979‑1067075

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑