Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1067373	1067383	11	2 [0]	[0] 2	rutC	3‑aminoacrylate deaminase

ATCACCCGGAAAAAACTCGGCGTAGATTTCGTTAATCGCGGCGTAATTTTTCCAGTC  >  NZ_CP009273/1067316‑1067372                                                         | aTCACCCGGAAAAAACTCGGCGTAGATTTCGTTAATCGCGGCGTAATTTTTCCAGTc  <  1:61162/57‑1 (MQ=255) aTCACCCGGAAAAAACTCGGCGTAGATTTCGTTAATCGCGGCGTAATTTTTCCAGTc  >  2:61162/1‑57 (MQ=255)                                                         | ATCACCCGGAAAAAACTCGGCGTAGATTTCGTTAATCGCGGCGTAATTTTTCCAGTC  >  NZ_CP009273/1067316‑1067372

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑