Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1225238	1225285	48	2 [1]	[1] 3	hlyE	hemolysin HlyE

CTTTATTCGCTTGTTTAACCGTGTTAGACAGGGTGGTAAAGAAATTCTGCACAGATTTTAACTTGTTCTTCAATTCTGGAATCAGTTTTCCTTCAACTACGCCC  >  NZ_CP009273/1225148‑1225251                                                                                          |               cTTTATTCGCTTGTTTAACCGTGTTAGACAGGGTGGTAAAGAAATTCTGCACAGATTTTAACTTGTTCTTCAATTCTGGAATCAGTTTTc                >  2:324794/1‑90 (MQ=255)               ttAACCGTGTTAGACAGGGTGGTAAAGAAATTCTGCACAGATTTTAACTTGTTCTTCAATTCTGGAATCAGTTTTCCTTCAACTACGccc  <  1:138632/90‑1 (MQ=255)                                                                                          |               CTTTATTCGCTTGTTTAACCGTGTTAGACAGGGTGGTAAAGAAATTCTGCACAGATTTTAACTTGTTCTTCAATTCTGGAATCAGTTTTCCTTCAACTACGCCC  >  NZ_CP009273/1225148‑1225251

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑