Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1310394	1310443	50	2 [0]	[0] 2	yciG/trpA	general stress protein/tryptophan synthase subunit alpha

TGTCGACACTCATTAAAATTAGTCGCTAATGAGAATTAGTCAAATTAAGCGCA  >  NZ_CP009273/1310341‑1310393                                                     | tgtCGACACTCATTAAAATTAGTCGCTAATGAGAATTAGTCAAATTAAGCGCa  <  1:178385/53‑1 (MQ=255) tgtCGACACTCATTAAAATTAGTCGCTAATGAGAATTAGTCAAATTAAGCGCa  >  2:178385/1‑53 (MQ=255)                                                     | TGTCGACACTCATTAAAATTAGTCGCTAATGAGAATTAGTCAAATTAAGCGCA  >  NZ_CP009273/1310341‑1310393

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑