Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	2143844	2143890	47	2 [0]	[0] 2	yegI	protein kinase YegI

ATAAGGATGCCGCCCACCAAACAAGACGTGAAAAATTAGCAACGCA  >  NZ_CP009273/2143798‑2143843                                              | aTAAGGATGCCGCCCACCAAACAAGACGTGAAAAATTAGCAACGCa  >  1:259765/1‑46 (MQ=255) aTAAGGATGCCGCCCACCAAACAAGACGTGAAAAATTAGCAACGCa  <  2:259765/46‑1 (MQ=255)                                              | ATAAGGATGCCGCCCACCAAACAAGACGTGAAAAATTAGCAACGCA  >  NZ_CP009273/2143798‑2143843

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑