Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	3165523	3165557	35	4 [1]	[1] 2	ygiZ	DUF2645 family protein

AGGTATACTGCAAATATTTCCTCCCGACTCAAGCATCCAGTCATACTTATTGAAAGCAAAAAAAGAATCTATTAACCAATAAGTAAGCATTATATATAGCA  >  NZ_CP009273/3165433‑3165533                                                                                          |            aGGTATACTGCAAATATTTCCTCCCGACTCAAGCATCCAGTCATACTTATTGAAAGCAAAAAAAGAATCTATTAACCAATAAGTAAGCAt             <  1:299548/90‑1 (MQ=255) aGGTATACTGCAAATATTTCCTCCCGACTCAAGCATCCAGTCATACTTATTGAAAGCAAAAAAAGAATCTATTAACCAATAAGTAAGCAt             <  2:126915/90‑1 (MQ=255) aGGTATACTGCAAATATTTCCTCCCGACTCAAGCATCCAGTCATACTTATTGAAAGCAAAAAAAGAATCTATTAACCAATAAGTAAGCAt             <  2:305068/90‑1 (MQ=255)            aaaTATTTCCTCCCGACTCAAGCATCCAGTCATACTTATTGAAAGCAAAAAAAGAATCTATTAACCAATAAGTAAGCATTATATATAGCa  >  2:188008/1‑90 (MQ=255)                                                                                          |            AGGTATACTGCAAATATTTCCTCCCGACTCAAGCATCCAGTCATACTTATTGAAAGCAAAAAAAGAATCTATTAACCAATAAGTAAGCATTATATATAGCA  >  NZ_CP009273/3165433‑3165533

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑