Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	3794730	3794745	16	2 [0]	[1] 2	rfaJ	lipopolysaccharide 1,2‑glucosyltransferase RfaJ

GGCAAAAATAATGTCATCCCTTTCAGTAAGACATTCATAACATCCTGATCAGGGTATTTATA  >  NZ_CP009273/3794668‑3794729                                                              | ggCAAAAATAATGTCATCCCTTTCAGTAAGACATTCATAACATCCTGATCAGGGTATTtata  <  1:302722/62‑1 (MQ=255) ggCAAAAATAATGTCATCCCTTTCAGTAAGACATTCATAACATCCTGATCAGGGTATTtata  >  2:302722/1‑62 (MQ=255)                                                              | GGCAAAAATAATGTCATCCCTTTCAGTAAGACATTCATAACATCCTGATCAGGGTATTTATA  >  NZ_CP009273/3794668‑3794729

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑