Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	3797716	3797747	32	2 [1]	[1] 2	rfaS	LPS core biosynthesis protein RfaS

ACAGATGAGTTAATAAAATACTCTAACTTATCCCAATCATCATGACCTATTATAAAAAAGCGAGATTCACTATAGATTTCTGAACCAAATAC  >  NZ_CP009273/3797626‑3797717                                                                                          |   aCAGATGAGTTAATAAAATACTCTAACTTATCCCAATCATCATGACCTATTATAAAAAAGCGAGATTCACTATAGATTTCTGAACCAAAt    <  2:131163/90‑1 (MQ=255)   aGATGAGTTAATAAAATACTCTAACTTATCCCAATCATCATGACCTATTATAAAAAAGCGAGATTCACTATAGATTTCTGAACCAAATAc  <  1:300508/90‑1 (MQ=255)                                                                                          |   ACAGATGAGTTAATAAAATACTCTAACTTATCCCAATCATCATGACCTATTATAAAAAAGCGAGATTCACTATAGATTTCTGAACCAAATAC  >  NZ_CP009273/3797626‑3797717

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑