Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	4241448	4241500	53	2 [1]	[1] 2	BW25113_RS20970	SopA family protein

GAATGTCGACAGGGAATTTTAAAGATTGCATTACAGAACAATTGGAATTAACTATTGATTATTCAGATATATTTTGGAATGAAGATCTCGA  >  NZ_CP009273/4241358‑4241448                                                                                          |  gAATGTCGACAGGGAATTTTAAAGATTGCATTACAGAACAATTGGAATTAACTATTGATTATTCAGATATATTTTGGAATGAAGATCTCg   >  1:49809/1‑90 (MQ=255)  aaTGTCGACAGGGAATTTTAAAGATTGCATTACAGAACAATTGGAATTAACTATTGATTATTCAGATATATTTTGGAATGAAGATCTCGa  <  2:217519/90‑1 (MQ=255)                                                                                          |  GAATGTCGACAGGGAATTTTAAAGATTGCATTACAGAACAATTGGAATTAACTATTGATTATTCAGATATATTTTGGAATGAAGATCTCGA  >  NZ_CP009273/4241358‑4241448

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑