Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	559290	559300	11	2 [0]	[0] 2	sfmF	fimbria assembly protein

GCGGTGTTCGGCCAGGTGTGGCGAAAGCGGATGCGATATTTATGATC  >  NZ_CP009273/559243‑559289                                               | gCGGTGTTCGGCCAGGTGTGGCGAAAGCGGATGCGATATTTATGATc  <  1:123653/47‑1 (MQ=255) gCGGTGTTCGGCCAGGTGTGGCGAAAGCGGATGCGATATTTATGATc  >  2:123653/1‑47 (MQ=255)                                               | GCGGTGTTCGGCCAGGTGTGGCGAAAGCGGATGCGATATTTATGATC  >  NZ_CP009273/559243‑559289

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑