Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	845033	845109	77	2 [1]	[1] 2	rhtA	threonine/homoserine exporter RhtA

CCGGCCCCCAGTGCCAGCGCACAGCCGGTTAAATCGACATGGGAAACGTCTTGCCCCAGCGGTAGCAGGAACCACAGACCAAGAACCGCCAGCACAACCCAGACGAAATCTACCGG  >  NZ_CP009273/845084‑845199                           |                                                                                          ccGCCCCCGAGCGCGGGCGAACACCGGGTAAAACCGACAGGGAAACCGTCTCCCCCCAGCGGTAGCAGAAACCACACACAAAAAgccgcc                            <  1:272792/90‑1 (MQ=255)                           ggTTAAATCGACATGGGAAACGTCTTGCCCCAGCGGTAGCAGGAACCACAGACCAAGAACCGCCAGCACAACCCAGACGAAATCTACCgg  >  1:158672/1‑90 (MQ=255)                           |                                                                                          CCGGCCCCCAGTGCCAGCGCACAGCCGGTTAAATCGACATGGGAAACGTCTTGCCCCAGCGGTAGCAGGAACCACAGACCAAGAACCGCCAGCACAACCCAGACGAAATCTACCGG  >  NZ_CP009273/845084‑845199

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 5 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑