Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1237022	1237286	265	2 [1]	[0] 2	cvrA	potassium/proton antiporter

GAGTGCGCATCCCGCCGTCGAGCAAAATAATCGCCAGTGCCAGGTTACTTACCATGTAGGCGAAGGGGTAATTATCAAACGGGATACCGC  >  NZ_CP009273/1237287‑1237376 |                                                                                          gAGTGCGCATCCCGCCGTCGAGCAAAATAATCGCCAGTGCCAGGTTACTTACCATGTAGGCGAAGGGGTAATTATCAAACGGGATAccgc  >  2:10221/1‑90 (MQ=255) gAGTGCGCATCCCGCCGTCGAGCAAAATAATCGCCAGTGCCAGGTTACTTACCATGTAGGCGAAGGGGTAATTATCAAACGGGATAccgc  >  2:322764/1‑90 (MQ=255) |                                                                                          GAGTGCGCATCCCGCCGTCGAGCAAAATAATCGCCAGTGCCAGGTTACTTACCATGTAGGCGAAGGGGTAATTATCAAACGGGATACCGC  >  NZ_CP009273/1237287‑1237376

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑