Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1288643	1288703	61	2 [0]	[1] 3	hns/tdk	DNA‑binding transcriptional regulator H‑NS/thymidine kinase

TTTACGAGAATTCCCTATTAAGCGAATGATGAAAAGTAGAACAGTCGCAATAAGAGCATGGACTTAGTATTGCACTATCTCCTGGAGGTCAACAGA  >  NZ_CP009273/1288661‑1288756                                            |                                                     tttACGAGAATTCCCTATTAAGCGAATGATGAAAAGTAGAACAGTCGCAATAAGAGCATGGACTTAGTATTGCACTATCTCCTGGAGGTc        <  1:7874/90‑1 (MQ=255)                                            gTCGCAATAAGAGCATGGACTTAGTATTGCACTATCTCCTGGAGGTCAACaga  <  1:144515/53‑1 (MQ=255)                                            gTCGCAATAAGAGCATGGACTTAGTATTGCACTATCTCCTGGAGGTCAACaga  >  2:144515/1‑53 (MQ=255)                                            |                                                     TTTACGAGAATTCCCTATTAAGCGAATGATGAAAAGTAGAACAGTCGCAATAAGAGCATGGACTTAGTATTGCACTATCTCCTGGAGGTCAACAGA  >  NZ_CP009273/1288661‑1288756

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑