Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	2135282	2135286	5	2 [0]	[1] 3	dcd	dCTP deaminase

TCCAGCACAATGCAACCAGACCAGCCCGGATCGATGCGGTGCGCGGTGACGTGCACCATCAGCCCCAGACGCGCCAGTGAGGAACGCCCG  >  NZ_CP009273/2135284‑2135373    |                                                                                       tCCAGCACAATGCAACCAGACCAGCCCGGATCGATGCGGTGCGCGGTGACGTGCACCATCAGCCCCAGACGCGCCAGTGAGGAACGCCCg  >  1:256418/1‑90 (MQ=255)    aGCACAATGCAACCAGACCAGCCCGGATCGATGCGGTGCGCGGTGAc                                          >  1:168838/1‑47 (MQ=255)    aGCACAATGCAACCAGACCAGCCCGGATCGATGCGGTGCGCGGTGAc                                          <  2:168838/47‑1 (MQ=255)    |                                                                                       TCCAGCACAATGCAACCAGACCAGCCCGGATCGATGCGGTGCGCGGTGACGTGCACCATCAGCCCCAGACGCGCCAGTGAGGAACGCCCG  >  NZ_CP009273/2135284‑2135373

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑