Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	2588974	2589012	39	2 [0]	[0] 2	tmcA	tRNA cytosine(34) acetyltransferase TmcA

AGTAAAGTTTGTAGTGCCGAGGGAGAACAGTGGTTTTCAGCATCTGGCCGCGGCGAAATCCACAGCCAGTCGCCAGGTAAGGCATCACGC  >  NZ_CP009273/2589013‑2589102 |                                                                                          aGTAAAGTTTGTAGTGCCGAGGGAGAACAGTGGTTTTCAGCATCTGGCCGCGGCGAAATCCACAGCCAGTCGCCAGGTAAGGCATCACGc  <  1:89960/90‑1 (MQ=255) aGTAAAGTTTGTAGTGCCGAGGGAGAACAGTGGTTTTCAGCATCGGGCCGCGGCGAAATCCACAGCCAGTCGCCAGGTAAGGCATCACGc  <  1:212898/90‑1 (MQ=255) |                                                                                          AGTAAAGTTTGTAGTGCCGAGGGAGAACAGTGGTTTTCAGCATCTGGCCGCGGCGAAATCCACAGCCAGTCGCCAGGTAAGGCATCACGC  >  NZ_CP009273/2589013‑2589102

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑