Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	528894	528905	12	2 [1]	[1] 5	allR	HTH‑type transcriptional repressor AllR

CTGGGCAGTCGTCTGCCACTGCATGCTTCCGGTGCGGGCAAAGCGCTGCTTTATCCGCTGGCGGAAGAGGAGTTGATGAGCATCATTCTGCAAACCG  >  NZ_CP009273/528899‑528995        |                                                                                          cTGGGCAGTCGTCTGCCACTGCATGCTTCCGGTGCGGGCAAAGCGCTGCTTTATCCGCTGGCGGAAGGGGAGTTGATGAGCATCATTCTg         >  1:250722/1‑90 (MQ=255)        gtcgtcTGCCACTGCATGCTTCCGGTGCGGGCAAAgcg                                                      >  1:320945/1‑38 (MQ=255)        gtcgtcTGCCACTGCATGCTTCCGGTGCGGGCAAAgcg                                                      <  2:320945/38‑1 (MQ=255)        gtcgtcTGCCACTGCATGCTTCCGGTGCGGGCAAAGCGCTGCTTTATCCGCTGGCGGAAGAGGAGTTGATGAGCATCATTCTGCAAACCg  >  1:10159/1‑90 (MQ=255)        gtcgtcTGCCACTGCATGCTTCCGGTGCGGGCAAAGCGCTGCTTTATCCGCTGGCGGAAGAGGAGTTGATGAGCATCATTCTGCAAACCg  >  1:106729/1‑90 (MQ=255)        |                                                                                          CTGGGCAGTCGTCTGCCACTGCATGCTTCCGGTGCGGGCAAAGCGCTGCTTTATCCGCTGGCGGAAGAGGAGTTGATGAGCATCATTCTGCAAACCG  >  NZ_CP009273/528899‑528995

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑