New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NZ_CP009273 360104 =NA (NA)60 (1.990) 30/168 0.1 47.6% intergenic (‑35/+251) lacZ/BW25113_RS23320 beta‑galactosidase/relaxase/mobilization nuclease domain‑containing protein
?NZ_CP009273 = 360286 66 (2.190)intergenic (‑217/+69) lacZ/BW25113_RS23320 beta‑galactosidase/relaxase/mobilization nuclease domain‑containing protein

Only 100 of 128 total aligned reads displayed.

TCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTC  >  NZ_CP009273/360197‑360375
                                                                                         |                                                                                         
tCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGgggaatt                                                                                           <  1:481061/90‑1 (MQ=38)
tCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGgggaatt                                                                                           <  1:164437/90‑1 (MQ=38)
 cAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTa                                                                                          <  2:34898‑M2/90‑2 (MQ=255)
   ggAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTaat                                                                                        <  1:197424‑M2/90‑4 (MQ=255)
      gagCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTaattcc                                                                                     <  2:2920‑M2/90‑7 (MQ=255)
        gCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGgggaattg                                                                                          <  2:835447/83‑1 (MQ=39)
        gCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGgggaattg                                                                                          >  1:835447/1‑83 (MQ=39)
        gCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTaattcctg                                                                                   <  1:259067‑M2/90‑9 (MQ=255)
        gCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTaattcctg                                                                                   <  1:76788‑M2/90‑9 (MQ=255)
        gCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTaattcctg                                                                                   <  1:703244‑M2/90‑9 (MQ=255)
        gCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGaatta                                                                                   >  2:657021/1‑90 (MQ=255)
        gCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGaatta                                                                                   >  2:533779/1‑90 (MQ=255)
        gCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGaatta                                                                                   >  2:399723/1‑90 (MQ=255)
        gCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGaatta                                                                                   >  2:633091/1‑90 (MQ=255)
        gCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGaatta                                                                                   >  1:37125/1‑90 (MQ=255)
        gCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGaatta                                                                                   >  1:655583/1‑90 (MQ=255)
        gCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGaatta                                                                                   >  2:223505/1‑90 (MQ=255)
        gCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGaatta                                                                                   >  1:769004/1‑90 (MQ=255)
         cGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTaattcctgg                                                                                  >  1:847046‑M2/1‑81 (MQ=255)
         cGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTaattcctgg                                                                                  >  2:845564‑M2/1‑81 (MQ=255)
         cGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTaattcctgg                                                                                  >  1:860345‑M2/1‑81 (MQ=255)
          gTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTaattcctggc                                                                                 >  2:703244‑M2/1‑80 (MQ=255)
           ttCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTaattcctggca                                                                                >  2:756370‑M2/1‑79 (MQ=255)
             cACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCt                                                                              <  2:701384/90‑1 (MQ=255)
                cGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTaattcctggcagttta                                                                           <  2:312259‑M2/90‑17 (MQ=255)
                cGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGa                                                                           >  1:459169/1‑90 (MQ=255)
                  acaaacaaCAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTaattcctggcagtttatg                                                                         <  1:319071‑M2/90‑19 (MQ=255)
                  acaaacaaCAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAg                                                                         <  2:751994/90‑1 (MQ=255)
                  acaaacaaCAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAg                                                                         <  1:657021/90‑1 (MQ=255)
                  acaaacaaCAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAg                                                                         <  1:320066/90‑1 (MQ=255)
                     aacaacAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTaattcctggcagtttatggcg                                                                      <  1:566088‑M2/90‑22 (MQ=255)
                       caacaGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTaattcctggcagtttatggcggg                                                                    <  2:64504‑M2/90‑24 (MQ=255)
                         acaGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTaattcctggcagtttatggcggggg                                                                  <  1:226808‑M2/90‑26 (MQ=255)
                         acaGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTaattcctggcagtttatggcggagc                                                                  <  1:608479‑M2/90‑26 (MQ=255)
                         acaGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAg                                                                  <  2:271419/90‑1 (MQ=255)
                           aGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTaattcctggcagtttatggcggggggc                                                                <  2:134636‑M2/90‑28 (MQ=255)
                            gATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTaattcctggcagtttatggcgggcgtcc                                                               >  2:574417‑M2/1‑62 (MQ=255)
                            gATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGc                                                               >  1:364700/1‑90 (MQ=255)
                               aaaaCGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTc                                                            <  2:336243/90‑1 (MQ=255)
                                 aaCGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTaattcctggcagtttatggcgggcgtcctgccc                                                          <  1:29570‑M2/90‑34 (MQ=255)
                                 aaCGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTaattcctggcagttta                                                                           <  2:488898‑M2/73‑17 (MQ=255)
                                 aaCGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTaattcctggcagttta                                                                           >  1:488898‑M2/1‑57 (MQ=255)
                                 aaCGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGt                                                          >  2:276290/1‑90 (MQ=255)
                                 aaCGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGt                                                          >  2:620466/1‑90 (MQ=255)
                                 aaCGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGt                                                          >  2:148595/1‑90 (MQ=255)
                                   cGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGa                                                        <  2:461605/90‑1 (MQ=255)
                                    gAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGAt                                                       >  1:639408/1‑90 (MQ=255)
                                        ggCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGc                                                   <  1:367717/90‑1 (MQ=255)
                                          cccAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCt                                                 <  2:195623/90‑1 (MQ=255)
                                           ccAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTa                                                >  2:548184/1‑90 (MQ=255)
                                           ccAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTa                                                <  1:284421/90‑1 (MQ=255)
                                            cAGTCTTTCGACTGAGCCTTTCGGTTTATTTGATGGCTGGGGAATTGGGAATTAATTCTTGAGGACGAAAGGGCCTCGTGATACGCCTAt                                               >  2:788507/1‑90 (MQ=38)
                                                cTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTaattcctggcagtttatggcgggcgtcctgcccgccaccctccgggcc                                           >  2:72937‑M2/1‑42 (MQ=255)
                                                cTTTCGACTGAGCCTTTCGTTTTATTGGATGCCCGGGGAATTaattcctggcagtttatggcgggcgtcctgcccgcctccctccgggcc                                           >  1:508619‑M2/1‑42 (MQ=255)
                                                  ttCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTaattcctggcagtttatggcgggcgtcctgcccgccaccctccgggccgt                                         >  1:72517‑M2/1‑40 (MQ=255)
                                                  ttCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTaattcctggcagtttatggcgggcgtcctgcccgccaccctccgggccgt                                         >  1:628657‑M2/1‑40 (MQ=255)
                                                  ttCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTaattcctggcagtttatggcgggcgtcctgcccgccaccctccgggccgt                                         >  1:570255‑M2/1‑40 (MQ=255)
                                                  ttCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTtat                                         <  1:223505/90‑1 (MQ=255)
                                                  ttCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTtat                                         >  2:751657/1‑90 (MQ=255)
                                                   tCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTtata                                        <  2:225532/90‑1 (MQ=255)
                                                        tGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTaattcctggcagtttatggcggggggccctcccgccccccccccggccgttggttt                                   <  2:180948‑M2/90‑57 (MQ=255)
                                                        tGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTaattcctggc                                                                                 >  2:322828‑M2/1‑34 (MQ=255)
                                                        tGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTaattcctggc                                                                                 <  1:322828‑M2/44‑11 (MQ=255)
                                                        tGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTaattcctgg                                                                                  <  2:531356‑M2/43‑10 (MQ=255)
                                                        tGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAg                                                                         >  2:312545/1‑52 (MQ=255)
                                                        tGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAg                                                                         <  1:312545/52‑1 (MQ=255)
                                                        tGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTa                                   >  1:706337/1‑90 (MQ=255)
                                                         gAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTaa                                  <  1:600708/90‑1 (MQ=255)
                                                           gCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATg                                <  2:430348/90‑1 (MQ=255)
                                                            ccTTTCGTTTTATTTGATGCCTGGGGAATTaattcctggcagtttatggcgggcgtcctgcccgcccccctccgggccgttgcttcgcaa                               >  1:451081‑M2/1‑30 (MQ=255)
                                                            ccTTTCGTTTTATTTGATGCCTGGGGAATTaattcctggcagtttatggcgggcgtcctgcccgccaccctccgggccgttgcttcgcaa                               >  1:760127‑M2/1‑30 (MQ=255)
                                                              tttCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAg                                       >  2:627476/1‑80 (MQ=255)
                                                              tttCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAg                                       <  1:627476/80‑1 (MQ=255)
                                                              tttCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCa                             <  1:751657/90‑1 (MQ=255)
                                                              tttCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCa                             <  1:180948/90‑1 (MQ=255)
                                                               ttCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCAt                            <  1:123240/90‑1 (MQ=255)
                                                                  gTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATggg                         <  2:467172/90‑1 (MQ=255)
                                                                   ttttATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGa                        <  2:531122/90‑1 (MQ=255)
                                                                    tttATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGTTACGCCTATTTTTATAGGTTAATGTCATGGGaa                       >  1:451581/1‑90 (MQ=255)
                                                                     ttATTTGATGCCTGGGGAATTaattcctggcagtttatggcgggggtcctgccccccacccccccggccgctggttcccaacgttcaaaa                      <  2:416555‑M2/90‑70 (MQ=255)
                                                                       aTTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGAt                    <  2:558781/90‑1 (MQ=255)
                                                                           gATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAg                <  2:364700/90‑1 (MQ=255)
                                                                             tGCCTGGGGAATTaattcctggcagtttatggcgggcgtcctgcccgcccccctccgggccgttgcttcgcaacgttcaaatccgctccc              >  1:302849‑M2/1‑13 (MQ=255)
                                                                             tGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGcc              >  1:466990/1‑90 (MQ=255)
                                                                                cTGGGGAATTaattcctggcagtttatggcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccggc           >  2:566088‑M2/1‑10 (MQ=255)
                                                                                cTGGGGAATTaattcctggcagtttatggcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccggc           >  1:548597‑M2/1‑10 (MQ=255)
                                                                                cTGGGGAATTaattcctggcagtttatggcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccggc           >  2:76788‑M2/1‑10 (MQ=255)
                                                                                cTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGAc           <  2:471354/90‑1 (MQ=255)
                                                                                 tGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGAcc          <  2:807893/90‑1 (MQ=255)
                                                                                 tGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGAcc          >  2:839938/1‑90 (MQ=255)
                                                                                 tGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGAcc          <  2:761877/90‑1 (MQ=255)
                                                                                     gaattgggaattAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGc      <  2:851255/90‑1 (MQ=255)
                                                                                     gaattgggaattAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGc      <  2:769004/90‑1 (MQ=255)
                                                                                     gAATTaattcctggcagtttatggcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccggcggatt      >  2:792434‑M2/1‑5 (MQ=255)
                                                                                     gAATTaattcctggcagtttatggcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccggcggatt      >  2:259067‑M2/1‑5 (MQ=255)
                                                                                     gAATTaattcctggcagtttatggcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccggcggatt      >  1:83946‑M2/1‑5 (MQ=255)
                                                                                     gAATTaattcctggcagtttatggcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccggcggatt      >  1:134636‑M2/1‑5 (MQ=255)
                                                                                     gAATTaattcctggcagtttatggcgggcgtcctccccgcccccctccgggccgttgcttcgcaacgttcaaatccgctcccggcggatt      >  2:287178‑M2/1‑5 (MQ=255)
                                                                                        ttaattcctggcagtttatggcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgctcccggcggatttgt   >  1:565632‑M2/1‑2 (MQ=255)
                                                                                         tgggaattAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTc  >  2:437729/1‑90 (MQ=255)
                                                                                         |                                                                                         
TCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTC  >  NZ_CP009273/360197‑360375

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.