Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1424340	1424348	9	3 [0]	[1] 2	stfR	prophage tail fiber N‑terminal domain‑containing protein

GGCCTCAGCCAGTGCCACCGCCGCCGGAAAATCGGCAGAAAGCGCCGCATCGTCTGCTTCAACAGCCACAACGAAGGCTGGCGAAGCCAC  >  NZ_CP009273/1424250‑1424339                                                                                          | gcccTCACCCAGTCCCCCCGCCGCGGAAAAACCGGCAGAAAGCGCCCCATCGTCTGCTTCACCAGCCACAACGAAGGCTGGCGAAGCCAc  <  1:260707/88‑1 (MQ=255)                                                       tGCTTCAACAGCCACAACGAAGGCTGGCGAAGCCAc  <  1:61654/36‑1 (MQ=255)                                                       tGCTTCAACAGCCACAACGAAGGCTGGCGAAGCCAc  >  2:61654/1‑36 (MQ=255)                                                                                          | GGCCTCAGCCAGTGCCACCGCCGCCGGAAAATCGGCAGAAAGCGCCGCATCGTCTGCTTCAACAGCCACAACGAAGGCTGGCGAAGCCAC  >  NZ_CP009273/1424250‑1424339

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 6 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑