Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1424660	1424664	5	2 [0]	[0] 8	stfR	prophage tail fiber N‑terminal domain‑containing protein

TCCGCCGTGGCGCTTGAGGATGCAAGTACGACGAAAAAGGGGATAGTACAGCTCAGCAGTGCGACCAACAGTACGTCTGAAACGCTGGCG  >  NZ_CP009273/1424665‑1424754 |                                                                                          tCCGCCGTGGCGCTTGAGGATGCAAGTACGACGAAAAAg                                                     <  1:502199/39‑1 (MQ=255) tCCGCCGTGGCGCTTGAGGATGCAAGTACGACGAAAAAg                                                     >  2:502199/1‑39 (MQ=255) tCCGCCGTGGCGCTTGAGGATGCAAGTACGACGAAAAAGGGGATAGt                                             >  1:125005/1‑47 (MQ=255) tCCGCCGTGGCGCTTGAGGATGCAAGTACGACGAAAAAGGGGATAGt                                             <  2:125005/47‑1 (MQ=255) tCCGCCGTGGCGCTTGAGGATGCAAGTACGACGAAAAAGGGGATAGTACAGCTCAGCAGTGCGa                            >  1:491744/1‑64 (MQ=255) tCCGCCGTGGCGCTTGAGGATGCAAGTACGACGAAAAAGGGGATAGTACAGCTCAGCAGTGCGa                            <  2:491744/64‑1 (MQ=255) tCCGCCGTGGCGCTTGAGGATGCAAGTACGACGAAAAAGGGGATAGTACAGCTCAGCAGTGCGACCAACAGTACGTCTGAAACGCTggcg  >  1:261519/1‑90 (MQ=255) tCCGCCGTGGCGCTTGAGGATGCAAGTACGACGAAAAAGGGGATAGTACAGCTCAGCAGTGCGACCAACAGTACGTCTGAAACGCTggcg  >  2:156585/1‑90 (MQ=255) |                                                                                          TCCGCCGTGGCGCTTGAGGATGCAAGTACGACGAAAAAGGGGATAGTACAGCTCAGCAGTGCGACCAACAGTACGTCTGAAACGCTGGCG  >  NZ_CP009273/1424665‑1424754

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑