New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NZ_CP009273	= 1684417	11 (0.540)	4 (0.220) +CAGTGACAAC	3/146	1.5	21.6%	coding (309/1509 nt)	ydgA	YdgA family protein
	?	NZ_CP009273	= 3404280	22 (1.080)					coding (642/966 nt)	dusB	tRNA dihydrouridine synthase DusB
Rejected: Coverage evenness skew score above cutoff.

GTCCCTTCCCGCTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NZ_CP009273/1684404‑1684417 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GTCGAGCACAGCT  <  NZ_CP009273/3404280‑3404268               ||||||||||              GTCCCTTCCCGCTTCAGTGACAACGTCGAGCACAGCT  <  1:234203/37‑1 GTCCCTTCCCGCTTCAGTGACAACGTCGAGCACAGCT  >  2:234203/1‑37 GTCCCTTCCCGCTTCAGTGACAACGTCGAGCACAGC   >  1:293053/1‑36 GTCCCTTCCCGCTTCAGTGACAACGTCGAGCACAGC   <  2:293053/36‑1               ||||||||||              GTCCCTTCCCGCTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NZ_CP009273/1684404‑1684417 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GTCGAGCACAGCT  <  NZ_CP009273/3404280‑3404268

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.