Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	2792343	2792355	13	2 [0]	[0] 2	stpA/alaE	DNA‑binding protein StpA/L‑alanine exporter AlaE

AATTGATTTAATTAAAAATAAATCATATCGGCATGTAAAAATCCACAA  >  NZ_CP009273/2792295‑2792342                                                | aaTTGATTTAATTAAAAATAAATCATATCGGCATGTAAAAATCCACaa  <  1:431743/48‑1 (MQ=255) aaTTGATTTAATTAAAAATAAATCATATCGGCATGTAAAAATCCACaa  >  2:431743/1‑48 (MQ=255)                                                | AATTGATTTAATTAAAAATAAATCATATCGGCATGTAAAAATCCACAA  >  NZ_CP009273/2792295‑2792342

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑