Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	4241606	4241636	31	3 [1]	[1] 3	BW25113_RS20970	SopA family protein

GTTCTGGCCGTAAAACTGGTGATGCAATTAAAAATACTTAATATTGTTAATAAAAACTTTATTGAGAATATGAAGAAAATATTTAGCCATTGTCCTTATATAAAAGATCCCA  >  NZ_CP009273/4241516‑4241627                                                                                          |                       gTTCTGGCCGTAAAACTGGTGATGCAATTAAAAATACTTAATATTGTTAATAAAAACTTTATTGAGAATATGAAGAAAATATTTAGCCAt                        <  1:398065/90‑1 (MQ=255) gTTCTGGCCGTAAAACTGGTGATGCAATTAAAAATACTTAATATTGTTAATAAAAACTTTATTGAGAATATGAAGAAAATATTTAGCCAt                        <  2:311320/90‑1 (MQ=255)                       tGCAATTAAAAATACTTAATATTGTTAATAAAAACTTTATTGAGAATATGAAGAAAATATTTAGCCATTGTCCTTATATAAAAGATCCCa  >  2:141067/1‑90 (MQ=255)                                                                                          |                       GTTCTGGCCGTAAAACTGGTGATGCAATTAAAAATACTTAATATTGTTAATAAAAACTTTATTGAGAATATGAAGAAAATATTTAGCCATTGTCCTTATATAAAAGATCCCA  >  NZ_CP009273/4241516‑4241627

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑