Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	553607	553612	6	2 [0]	[1] 2	folD/fimA	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD/type 1 fimbrial major subunit FimA

TAAAGTAATCGGTTATATACGGATGTGGAGTCGATAAATGAGATTGAAGGAATATATATGAAATTAAGATTTATTTCGTCTGCGCTGGCTGC  >  NZ_CP009273/553611‑553702   |                                                                                          taaaGTAATCGGTTATATACGGATGTGGAGTCGATAAATGAGATTGAAGGAATATATATGAAATTAAGATTTATTTCGTCTGCgctggct    >  2:272660/1‑90 (MQ=255)   aaGTAATCGGTTATATACGGATGTGGAGTCGATAAATGAGATTGAAGGAATATATATGAAATTAAGATTTATTTCGTCTGCGCTGGCTGc  >  1:396379/1‑90 (MQ=255)   |                                                                                          TAAAGTAATCGGTTATATACGGATGTGGAGTCGATAAATGAGATTGAAGGAATATATATGAAATTAAGATTTATTTCGTCTGCGCTGGCTGC  >  NZ_CP009273/553611‑553702

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑