Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1012388	1012450	63	3 [1]	[1] 3	ycbZ	Lon protease family protein

CCATCAACTTCACTGTATGACTGCTCAAATGTCAGCGATGCTGAGAAGGGGATCTGTTGCTCAAGCTGTAGTTCCGACATCAGGAACGCT  >  NZ_CP009273/1012449‑1012538   |                                                                                        ccATCAACTTCACTGTATGACTGCTCAAATGTCAGCGATGCTGAGAAGGGGATCTGTTGCTCAAGCTGTAGTTCCGACATCAGGAACGCt  >  1:395033/1‑90 (MQ=255)   aTCAACTTCACTGTATGACTGCTCAAATGTCAGCGATGCTga                                                >  1:273125/1‑42 (MQ=255)   aTCAACTTCACTGTATGACTGCTCAAATGTCAGCGATGCTga                                                <  2:273125/42‑1 (MQ=255)   |                                                                                        CCATCAACTTCACTGTATGACTGCTCAAATGTCAGCGATGCTGAGAAGGGGATCTGTTGCTCAAGCTGTAGTTCCGACATCAGGAACGCT  >  NZ_CP009273/1012449‑1012538

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑