Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	2669867	2669867	1	2 [0]	[0] 2	yphD	ABC transporter permease

GGCAACGAAACTTGGTACATTAAACACGCCGCGCAGCACCCCGGCCAGCGTTCCCATCAGCGCGCCTAACAGCAACACCAGCAGGCACGC  >  NZ_CP009273/2669777‑2669866                                                                                          | ggCAACGAAACTTGGTACATTAAACACGCCGCGCAGCACCCCGGCCAGCGTTCCCATCAGCGCGCCTAACAGCAACACCAGCAGGCACGc  >  1:358891/1‑90 (MQ=255) ggCAACGAAACTTGGTACATTAAACACGCCGCGCAGCACCCCGGCCAGCGTTCCCATCAGCGCGCCTAACAGCAACACCAGCAGGCACGc  >  1:475943/1‑90 (MQ=255)                                                                                          | GGCAACGAAACTTGGTACATTAAACACGCCGCGCAGCACCCCGGCCAGCGTTCCCATCAGCGCGCCTAACAGCAACACCAGCAGGCACGC  >  NZ_CP009273/2669777‑2669866

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑