Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	2000989	2000998	10	2 [1]	[0] 4	amyA	alpha‑amylase

AATAAAACCTGGCGTGATTTTCTGGGGAACCGGCAAGAGAGAGTAGTGACCGACGAAAACGGCGAAGCAACCTTCTTTTGCAACGGCGGC  >  NZ_CP009273/2000999‑2001088 |                                                                                          aaTAAAACCTGGCGTGATTTTCTGGGGAACCGGCAAGAGAGAGTAGTGACCGACGAAAACGGCGAAGCAACCTTCTTTTGCAACggcggc  <  1:293822/90‑1 (MQ=255) aaTAAAACCTGGCGTGATTTTCTGGGGAACCGGCAAGAGAGAGTAGTGACCGACGAAAACGGCGAAGCAACCTTCTTTTGCAACggcggc  <  1:564396/90‑1 (MQ=255) aaTAAAACCTGGCGTGATTTTCTGGGGAACCGGCAAGAGAGAGTAGTGACCGACGAAAACGGCGAAGCAACCTTCTTTTGCAACggcggc  >  2:192484/1‑90 (MQ=255) aaTAAAACCTGGCGTGATTTTCTGGGGAACCGGCAAGAGAGAGTAGTGACCGACGAAAACGGCGAAGCAACCTTCTTTTGCAACggcggc  >  2:564396/1‑90 (MQ=255) |                                                                                          AATAAAACCTGGCGTGATTTTCTGGGGAACCGGCAAGAGAGAGTAGTGACCGACGAAAACGGCGAAGCAACCTTCTTTTGCAACGGCGGC  >  NZ_CP009273/2000999‑2001088

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑