| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP009273 | 1,240,670 | Δ1 bp | coding (55/441 nt) | BW25113_RS06225 → | hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP009273 | 1,240,667 | 0 | G | . | 100.0% | 66.8 / NA | 17 | coding (52/441 nt) | BW25113_RS06225 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base . (12/5); total (12/5) | |||||||||||
ATCCTTTTTTAATTATTGTTTCGTTGTTTTTGGTGTGATTCAGAAAATAAATATTTTAGACAGTAGCCAGTCAGGCGTTAAAAATGGGGCGGATAGTGAGGCGGTTTTGGCTGCGCTTATTGAACA‑TTTAGAATTGATCAATCCTTCTGGCAGATTAAGCCAAAATACCC > NZ_CP009273/1240582‑1240751 | aTCCTTTTTTAATTATTGTTTCGTTGTTTTTGGTGTGATTCAGAAAATAAATATTTTAGACAGTAGCCAGTCAGGCGTTAAAAATgggcg > 1:450754/1‑88 (MQ=255)aTCCTTTTTTAATTATTGTTTCGTTGTTTTTGGTGTGATTCAGAAAATAAATATTTTAGACAGTAGCCAGTCAGGCGTTAAAAATgggcg > 1:525448/1‑88 (MQ=255)aTCCTTTTTTAATTATTGTTTCGTTGTTTTTGGTGTGATTCAGAAAATAAATATTTTAGACAGTAGCCAGTCAGGCGTTAAAAATgggcg > 2:504940/1‑88 (MQ=255) ttAATTATTGTTTCGTTGTTTTTGGTGTGATTCAGAAAATAAATATTTTAGACAGTAGCCAGTCAGGCGTTAAAAAT‑GGGCGGATAGTGa > 1:148067/1‑90 (MQ=255) aaTTATTGTTTCGTTGTTTTTGGTGTGATTCAGAAAATAAATATTTTAGACAGTAGCCAGTCAGGCGTTAAAAAT‑GGGCGGATAGTGAgg < 2:832535/90‑1 (MQ=255) aaTTATTGTTTCGTTGTTTTTGGTGTGATTCAGAAAATAAATATTTTAGACAGTAGCCAGTCAGGCGTTAAAAAT‑GGGCGGATAGTGAgg > 1:186938/1‑90 (MQ=255) tgtgATTCAGAAAATAAATATTTTAGACAGTAGCCAGTCAGGCGTTAAAAAT‑GGGCGGATAGTGAGGCGGTTTTGGCTGCGCTTATTGaa < 1:784167/90‑1 (MQ=255) tgtgATTCAGAAAATAAATATTTTAGACAGTAGCCAGTCAGGCGTTAAAAAT‑GGGCGGATAGTGAGGCGGTTTTGGCTGCGCTTATTGaa < 1:881942/90‑1 (MQ=255) ataaataTTTTAGACAGTAGCCAGTCAGGCGTTAAAAAT‑GGGCGGATAGTGAGGCGGTTTTGGCTGGGCTTTTTGAACA‑TTTTGAATTGa > 1:116324/1‑90 (MQ=255) taaataTTTTAGACAGTAGCCAGTCAGGCGTTAAAAAT‑GGGCGGATAGTGAGGCGGTTTTGGCTGCGCTTATTGAACA‑ttt < 1:433169/81‑1 (MQ=255) taaataTTTTAGACAGTAGCCAGTCAGGCGTTAAAAAT‑GGGCGGATAGTGAGGCGGTTTTGGCTGCGCTTATTGAACA‑ttt > 2:433169/1‑81 (MQ=255) atTTTAGACAGTAGCCAGTCAGGCGTTAAAAAT‑GGGCGGATAGTGAGGCGGGTTTTGCTGCGCTTATTGAAAA‑TTTAAAATTGATTAATc > 1:665973/1‑90 (MQ=255) gTAGCCAGTCAGGCGTTAAAAAT‑GGGCGGATAGTGAGGCGGTTTTTGCTGCGCTTATTTAAAA‑ATTTAAATTTGTTAAACCTTCTGGCAg > 2:560436/1‑90 (MQ=255) gTAGCCAGTCAGGCGTTAAAAAT‑GGGCGGATAGTGAGGCGGTTTTTGCTGCGCTTATTGAACA‑TTTAGAATTGATCAATCCTTCTGGCAg > 1:721426/1‑90 (MQ=255) gTAGCCAGTCAGGCGTTAAAAAT‑GGGCGGATAGTGAGGCGGTTTTGGCTGCGCTTATTGAACA‑TTTAGAATTGATCAATCCTTCTGGCAg > 1:894165/1‑90 (MQ=255) tCAGGCGTTAAAAAT‑GGGCGGATAGTGAGGCGGTTTTGGCTGCGCTTATTGAACA‑TTTAGAATTGATCAATCCTTCTGGCAGATTAAGcc < 2:450754/90‑1 (MQ=255) aGGCGTTAAAAAT‑GGGCGGATAGTGAGGCGGTTTTTGCTGCGCTTTTTTAACA‑TTTTAAATTTATCAATCCTTTTTGCAGATTAAACCaa > 1:682429/1‑90 (MQ=255) aGGCGTTAAAAAT‑GGGCGGATAGTGAGGCGGTTTTGGCTGCGCTTATTTAAAA‑TTTAGAATTGATCAAACCTTCTGGCAGATTAAACCaa > 1:112580/1‑90 (MQ=255) aGGCGTTAAAAAT‑GGGCGGATAGTGAGGCGGTTTTGGCTGCGCTTATTGAACA‑TTTAAAATTGATCAATCCTTCTTGCAGATTAAACCaa > 1:136869/1‑90 (MQ=255) aaaaaT‑GGGCGGATAGTGAGGCGGTTTTTGCGGGGCTTTTTTAACATTTTAAAATTG‑TTAAACCTTCTGGGGGGTTTAACCAAAATAacc > 2:893787/1‑90 (MQ=255) | ATCCTTTTTTAATTATTGTTTCGTTGTTTTTGGTGTGATTCAGAAAATAAATATTTTAGACAGTAGCCAGTCAGGCGTTAAAAATGGGGCGGATAGTGAGGCGGTTTTGGCTGCGCTTATTGAACA‑TTTAGAATTGATCAATCCTTCTGGCAGATTAAGCCAAAATACCC > NZ_CP009273/1240582‑1240751 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |