| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NZ_CP009273 | = 4195934 | 21 (0.660) | 3 (0.110) | 3/146 | 2.4 | 12.2% | coding (1527/1590 nt) | purH | bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase |
| ? | NZ_CP009273 | 4196004 = | 25 (0.900) | coding (1457/1590 nt) | purH | bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
GTGCTCGTCGGCGGCGGCAATCACTTCGTCATCACGGATAGAACCGCCAGGCTGGATTACGCAGGTCACGCCCGCAGCGGCGGCGGCATCAATACCGTCGCGGAACGGGAAGAACGCGTCAGAAGCCATCGAGGAACCTTTCACTTCCAGGCCTTCATCGGCCGCTTTAATACCGG > NZ_CP009273/4195916‑4196091 | gTGCTCGTCGGCGGCGGCAATCACTTCGTCATCACGGATAGAACCGCCAGGCTGGATTACGCAGGTCACGCCCGCAGCGGCGGCGGCATc > 2:761631/1‑90 (MQ=255)gTGCTCGTCGGCGGCGGCAATCACTTCGTCATCACGGATAGAACCGCCAGGCTGGATTACGCAGGTCACGCCCGCAGCGGCGGCGGCATc > 1:546416/1‑90 (MQ=255)gTGCTCGTCGGCGGCGGCAATCACTTCGTCATCACGGATAGAACCGCCAGGCTGGATTACGCAGGTCACGCCCGCAGCGGCGGCGGCATc > 1:706553/1‑90 (MQ=255)gTGCTCGTCGGCGGCGGCAATCACTTCGTCATCACGGATAGAACCGCCAGGCTGGATTACGCAAGTCACGCCCGCAGCGGCGGCGGCATc > 2:900344/1‑90 (MQ=255) gCTCGTCGGCGGCGGCAATCACTTCGTCATCACGGATAGAACCGCCAGGCTGGATTACGCAGGTCACGCCCGCAGCGGCGGCGGCATCaa > 1:808648/1‑90 (MQ=255) cgtcgGCGGCGGCAATCACTTCGTCATCACGGATAGAACCGCCAGGCTGGATTACGCAGGTCACGCCCGCAGCGGCGGCGGCATCAATAc > 1:578922/1‑90 (MQ=255) cggcAATCCCTCCGTCATCACGGATAGACCCGCCAGGCTGGATTACGCAGGTCACGCCCGCAGCGGCGGCGGCATCAATACCGTCGCGGa < 2:294365/90‑1 (MQ=255) cTTCGTCATCACGGATAGAACCGCCAGGCTGGATTACGCAGGTCACGCCCGCAGCGGCGGCGGCATCAATACCGTCGCGGAACGGgaaga > 1:639842/1‑90 (MQ=255) aTAGAACCGCCAGGCTGGATTACGCAGGTCACGCCCGCAGCGGCGGCGGCATCAATACCGTCGCGGAACGGGAAGAACGCGTCAGAAGcc > 2:317509/1‑90 (MQ=255) aTAGAACCGCCAGGCTGGATTACGCAGGCCACGCCCGCAGCGGCGGCGGCATCAATACCGTCGCGGAACGGGAAGAACGCGTCAGAAGcc < 2:706553/90‑1 (MQ=255) cGCCAGGCTGGATTACGCAGGTCACGCCCGCAGCGGCGGCGGCATCAATACCGTCGCGGAACGGGAAGAACGCGTCAGAAGCCATCGAgg > 1:291616/1‑90 (MQ=255) cGCCAGGCTGGATTACGCAGGTCACGCCCGCAGCGGCGGCGGCATCAATACCGTCGCGGAACGGGAAGAACGCGTCAGAAGCCATCGAgg > 2:744783/1‑90 (MQ=255) cGCCAGGCTGGATTACGCAGGTCACGCCCGCAGCGGCGGCGGCATCAATACCGTCGCGGAACGGGAAGAACGCGTCAGAAGCCATCGAgg < 1:744783/90‑1 (MQ=255) cGCCAGGCTGGATTACGCAGGTCACGCCCGCAGCGGCGGCGGCATCAATACCGTCGCGGAACGGGAAGAACGCGTCAGAAGCCATCGAgg > 1:655771/1‑90 (MQ=255) gCCAGGCTGGATTACGCAGGTCACGCCCGCAGCGGCGGCGGCATCAATACCGTCGCGGAACGGGAAGAACGCGTCAGAAGCCATCGAGGa > 1:823579/1‑90 (MQ=255) gCCAGGCTGGATTACGCAGGTCACGCCCGCAGCGGCGGCGGCATCAATACCGTCGCGGAACGGGAAGAACGCGTCAGAAGCCATCGAGGa < 2:171724/90‑1 (MQ=255) ccAGGCTGGATTACGCAGGTCACGCCCGCAGCGGCGGCGGCATCAATACCGTCGCGGAACGGGAAGAACGCGTCAGAAGCCATCGAGGaa > 2:8894/1‑90 (MQ=255) ggATTACGCAGGTCACGCCCGCAGCGGCGGCGGCATCAATACCGTCGCGGAACGGGAAGAACGCGTCAGAAGCCATCGAGGAACCTTTCa < 1:317509/90‑1 (MQ=255) gagcatcgcaataccgtgctcggcggcggcggcaTCAATACCGTCGCGGAAAGGGAAGAACGCGTCAGAAGCCATCGAGGAACCTTTCAc > 2:487673‑M2/35‑90 (MQ=255) gcatcgcaataccgtgctcgtcggcggcggcaTCAATACCGTCGCGGAACGGGAAGAAc > 1:307790‑M2/33‑59 (MQ=255) gcatcgcaataccgtgctcgtcggcggcggcaTCAATACCGTCGCGGAACGGGAAGAAc < 2:307790‑M2/27‑1 (MQ=255) aCGCAGGTCACGCCCGCAGCGGCGGCGGCATCAATACCGTCGCGGAACGGGAAGAACGCGTCAGAAGCCATCGAGGAACCTTTCACTTcc < 2:209836/90‑1 (MQ=255) aGGTCACGCCCGCAGCGGCGGCGGCATCAATACCGTCGCGGAACGGGAAGAACGCGTCAGAAGCCATCGAGGAACCTTTCACTTCCAGGc < 2:663138/90‑1 (MQ=255) ggTCACGCCCGCAGCGGCGGCGGCATCAATACCGTCGCGGAACGGGAAGAACGCGTCAGAAGCCATCGAGGAACCTTTCACTTCCAGGcc > 1:884232/1‑90 (MQ=255) gCAGCGGCGGCGGCATCAATACCGTCGCGGAACGGGAAGAACGCGTCAGAAGCCATCGAGGAACCTTTCACTTCCAGGCCTTCATCGGcc < 1:516712/90‑1 (MQ=255) gCAGCGGCGGCGGCATCAATACCGTCGCGGAACGGGAAGAACGCGTCAGAAGCCATCGAGGAACCTTTCACTTCCAGGCCTTCATCGGcc < 1:761631/90‑1 (MQ=255) gCAGCGGCGGCGGCATCAATACCGTCGCGGAACGGGAAGAACGCGTCAGAAGCCATCGAGGAACCTTTCACTTCCAGGCCTTCATCGGcc < 2:28/90‑1 (MQ=255) gCAGCGGCGGCGGCATCAATACCGTCGCGGAACGGGAAGAACGCGTCAGAAGCCATCGAGGAACCTTTCACTTCCAGGCCTTCATCGGcc > 2:269682/1‑90 (MQ=255) ggcggcggcaTCAATACCGTCGCGGAACGGGAAGAACGCGTCAGAAGCCATCGAGGAACCTTTCAc > 2:423142‑M2/11‑66 (MQ=255) ggcggcggcaTCAATACCGTCGCGGAACGGGAAGAACGCGTCAGAAGCCATCGAGGAACCTTTCAc < 1:423142‑M2/56‑1 (MQ=255) caTCAATACCGTCGCGGAACGGGAAGAACGCGTCAGAAGCCATCGAGGAACCTTTCACTTCCAGGCCTTCATCGGCCGCTTTAATACCgg > 2:381586‑M2/3‑90 (MQ=255) caTCAATACCGTCGCGGAACGGGAAGAACGCGTCAGAAGCCATCGAGGAACCTTTCACTTCCAGGCCTTCATCGGCCGCTTTAATACCgg > 1:187010‑M2/3‑90 (MQ=255) | GTGCTCGTCGGCGGCGGCAATCACTTCGTCATCACGGATAGAACCGCCAGGCTGGATTACGCAGGTCACGCCCGCAGCGGCGGCGGCATCAATACCGTCGCGGAACGGGAAGAACGCGTCAGAAGCCATCGAGGAACCTTTCACTTCCAGGCCTTCATCGGCCGCTTTAATACCGG > NZ_CP009273/4195916‑4196091 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |