| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP009273 | 2,759,232 | (G)6→7 | intergenic (‑97/‑45) | yfjM ← / → rnlA | DUF1524 domain‑containing protein/type II toxin‑antitoxin system toxin mRNA endoribonuclease RnlA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP009273 | 2,759,226 | 1 | . | G | 100.0% | 31.0 / NA | 10 | intergenic (‑91/‑51) | yfjM/rnlA | DUF1524 domain‑containing protein/type II toxin‑antitoxin system toxin mRNA endoribonuclease RnlA |
| Reads supporting (aligned to +/- strand): ref base . (0/0); new base G (5/5); total (5/5) | |||||||||||
GTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCA‑GGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATCCAGGAAATGACAATCAGGAGTTACAAAAACTT > NZ_CP009273/2759139‑2759302 | gtgGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCA‑gg > 1:23615/1‑90 (MQ=255) ggACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCA‑gggg < 1:652273/90‑1 (MQ=255) cTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCA‑ggggggg > 2:294047/1‑89 (MQ=255) tGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCA‑gggggggt < 2:743603/90‑3 (MQ=255) tGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCA‑gggggggt < 2:656570/90‑3 (MQ=255) gCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCA‑gggggggta > 1:726274/1‑87 (MQ=255) cccccccGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCA‑gggggggtat < 1:168114/90‑5 (MQ=255) cccccccGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCA‑gggggggtat < 2:453256/90‑5 (MQ=255) cccccccGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCA‑gggggggtat < 1:529082/90‑5 (MQ=255) tGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGGTATTATTGTAGAGTTTCCCCat < 2:23615/90‑1 (MQ=255) cccTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGGTATTATTGTAGAGTTTCCCCatat < 1:540367/90‑1 (MQ=255) cccTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGGTATTATTGTAGAGTTTCCCCatat < 2:569825/90‑1 (MQ=255) tGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATg > 2:595454/1‑90 (MQ=255) tGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATg > 1:206545/1‑90 (MQ=255) gCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATcc > 2:167403/1‑90 (MQ=255) gCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATcc > 1:503474/1‑90 (MQ=255) gCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCA‑gggggg > 1:564774/1‑50 (MQ=255) gCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCA‑gggggg < 2:564774/50‑1 (MQ=255) ggTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATCCAGGAAATGACaa > 2:66192/1‑90 (MQ=255) ggCTAAATTTAGCAAATCAATACACTTCAGGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATCCAGGAAATGACAATCa < 2:726274/90‑1 (MQ=255) tCAATACACTTCAGGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATCCAGGAAATGACAATCAGGAGTTACAAAAACtt < 1:167403/90‑1 (MQ=255) | GTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCA‑GGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATCCAGGAAATGACAATCAGGAGTTACAAAAACTT > NZ_CP009273/2759139‑2759302 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |