| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP009273 | 2,614,493 | T→C | intergenic (‑262/‑63) | upp ← / → purM | uracil phosphoribosyltransferase/phosphoribosylformylglycinamidine cyclo‑ligase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP009273 | 2,614,493 | 0 | T | C | 100.0% | 38.2 / NA | 12 | intergenic (‑262/‑63) | upp/purM | uracil phosphoribosyltransferase/phosphoribosylformylglycinamidine cyclo‑ligase |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (7/5); total (7/5) | |||||||||||
TACCCTGGCACAAGTCTTCTTTCGCCGCGCGCCTGGGGAAAAGACGTGCAAAAAGGTTGTGTAAAGCAGTCTCGCAAACGTTTGCTTTCCCTGTTAGAATTGCGCCGAATTTTATTTTTCTACCGCAAGTAACGCGTGGGGACCCAAGCAGTGACCGATAAAA > NZ_CP009273/2614406‑2614568 | tACCCTGGCACAAGTCTTCTTTCGCCGCGCGCCTGGGGAAAAGACGTGCAAAAAGGTTGTGTAAAGCAGTCTCGCAAACGTTTGCTTccc < 2:203720/90‑1 (MQ=255)tACCCTGGCACAAGTCTTCTTTCGCCGCGCGCCTGGGGAAAAGACGTGCAAAAAGGTTGTGTAAAGCAGTCTCGCAAACGTTTGCTTccc < 2:668999/90‑1 (MQ=255) caAGTCTTCTTTCGCCGCGCGCCTGGGGAAAAGACGTGCAAAAAGGTTGTGTAAAGCAGTCTCGCAAACGTTTGCTTCCCCTGTTAGAAt < 1:645080/90‑1 (MQ=255) aGTCTTCTTTCGCCGCGCGCCTGGGGAAAAGACGTGCAAAAAGGTTGTGTAAAGCAGTCTCGCAAACGTTTGCTTCCCCTGTTAGAATTg > 2:409796/1‑90 (MQ=255) ttcttTCGCCGCGCGCCTGGGGAAAAGACGTGCAAAAAGGTTGTGTAAAGCAGTCTCGCAAACGTTTGCTTCCCCTGTTAGAATTGCGcc < 1:282479/90‑1 (MQ=255) gccgcGCGCCTGGGGAAAAGACGTGCAAAAAGGTTGTGTAAAGCAGTCTCGCAAACGTTTGCTTCCCCTGTTAGAATTGCGCCGAatttt > 2:82891/1‑90 (MQ=255) aaaGGTTGTGTAAAGCAGTCTCGCAAACGTTTGCTTCCCCTGTTAGAATTGCGCCGAATTTTATTTTTCTACCGCAAGTAACGCGTgggg < 2:619565/90‑1 (MQ=255) tgtgTAAAGCAGTCTCGCAAACGTTTGCTTCCCCTGTTAGAATTGCGCCGAATTTTATTTTTCTACCGCAAGTAACGCGTGGGGACCCaa > 1:186230/1‑90 (MQ=255) tgtgTAAAGCAGTCTCGCAAACGTTTGCTTCCCCTGTTAGAATTGCGCCGAATTTTATTTTTCTACCGCAAGCAACGCTTGGGGACCCaa > 1:388723/1‑90 (MQ=255) aGCAGTCTCGCAAACGTTTGCTTCCCCTGTTAGAATTGCGCCGAATTTTATTTTTCTACCGCAAGTAACGCGTGGGGACCCAAGCAg < 1:239652/87‑1 (MQ=255) aGCAGTCTCGCAAACGTTTGCTTCCCCTGTTAGAATTGCGCCGAATTTTATTTTTCTACCGCAAGTAACGCGTGGGGACCCAAGCAg > 2:239652/1‑87 (MQ=255) gTCTCGCAAACGTTTGCTTCCCCTGTTAGAATTGCGCCGAATTTTATTTTTCTACCGCAAGTAACGCGTGGGGACCCAAGCAGTGACCGa > 2:575592/1‑90 (MQ=255) ctcGCAAACGTTTGCTTCCCCTGTTAGAATTGCGCCGAATTTTATTTTTCTACCGCAAGTAACGCGTGGGGACCCAAGCAGTGACCGATa > 2:59831/1‑90 (MQ=255) gCAAACGTTTGCTTCCCCTGTTAGAATTGCGCCGAATTTTATTTTTCTACCGCAAGTAACGCGTGGGGACCCAAGCAGTGACCGATaaaa < 2:96877/90‑1 (MQ=255) | TACCCTGGCACAAGTCTTCTTTCGCCGCGCGCCTGGGGAAAAGACGTGCAAAAAGGTTGTGTAAAGCAGTCTCGCAAACGTTTGCTTTCCCTGTTAGAATTGCGCCGAATTTTATTTTTCTACCGCAAGTAACGCGTGGGGACCCAAGCAGTGACCGATAAAA > NZ_CP009273/2614406‑2614568 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |