| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP009273 | 1,568,198 | A→G | F417S (TTC→TCC) | pqqL ← | insulinase family protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP009273 | 1,568,198 | 0 | A | G | 100.0% | 62.8 / NA | 19 | F417S (TTC→TCC) | pqqL | insulinase family protein |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (8/11); total (8/11) | |||||||||||
AACTGCTGCCATTTTTCCGCCAGACTTTGCACGGTAATTTGCTGCCACAGACGTTTCGAAAGTTGATATGTCTCTTCCGGCGACAAGAACGGCGTATTATTTAATGAGCTGGATGCCAGGCGACTGGTCAGCATACGTAAATCACGTTCAGCTTGCTGATCAACCGCAT > NZ_CP009273/1568111‑1568279 | aaCTGCTGCCATTTTTCCGCCAGACTTTGCACGGTAATTTGCTGCCACAGACGTTTCGAAAGTTGATATGTCTCTTCCGGCGACAAGGAc < 2:617792/90‑1 (MQ=255) ctgctgCCATTTTTCCGCCAGACTTTGCACGGTAATTTGCTGCCACAGACGTTTCGAAAGTTGATATGTCTCTTCCGGCGACAAGGACgg < 2:704344/90‑1 (MQ=255) ctgctgCCATTTTTCCGCCAGACTTTGCACGGTAATTTGCTGCCACAGACGTTTCGAAAGTTGATATGTCTCTTCCGGCGACAAGGACgg < 2:461842/90‑1 (MQ=255) cagctgcCTTGTTTCCGCAAGATTTTGCCCGCTAATTTGCTGCCAGAGAAGTTTCGAAAGTTGATATGTCTCTTCCGGCGACAAGGACgc < 1:599956/88‑2 (MQ=255) ctgcCATTTTTCCGCCAGACTTTGCACGGTAATTTGCTGCCACAGACGTTTCGAAAGTTGATATGTCTCTTCCGGCGACAAGGACGGCGt > 2:239185/1‑90 (MQ=255) tgcCATTTTTCCGCCAGACTTTGCACGGTAATTTGCTGCCACAGACGTTTCGAAAGTTGATATGTCTCTTCCGGCGACAAGGACGGCGta > 2:290641/1‑90 (MQ=255) ttCCGCCAGACTTTGCACGGTAATTTGCTGCCACAGACGTTTCGAAAGTTGATATGTCTCTTCCGGCGACAAGGACGGCGTATTATTTaa < 1:434124/90‑1 (MQ=255) cACGGTAATTTGCTGCCACAGCCGTTTCGAAAGTTGATATGGCCCTTCCGGCGACAAGGACCGCGTATTATTTAATGAGCTGGATGCCAg < 1:749930/90‑1 (MQ=255) gTAATTTGCTGCCACAGACGTTTCGAAAGTTGATATGTCTCTTCCGGCGACAAGGACGGCGTATTATTTAATGAGCTGGATGCCAGGCGa > 1:269370/1‑90 (MQ=255) tgctgcCACAGACGTTTCGAAAGTTGATATGTCTCTTCCGGCGACAAGGACGGCGTATTATTTAATGAGCTGGATGCCAGGCGACTGGTc < 2:166452/90‑1 (MQ=255) gcCACAGACGTTTCGAAAGTTGATATGTCTCTTCCGGCGACAAGGACGGCGta < 2:237350/53‑1 (MQ=255) gcCACAGACGTTTCGAAAGTTGATATGTCTCTTCCGGCGACAAGGACGGCGta > 1:237350/1‑53 (MQ=255) aaGTTGATATGTCTCTTCCGGCGACAAGGACGGCGTATTATTTAATGAGCTGGATGCCAGGCGACTGGTCAGCATACGTAAATCACGTTc > 1:95123/1‑90 (MQ=255) aaGTTGATATGTCTCTTCCGGCGACAAGGACGGCGTATTATTTAATGAGCTGGATGCCAGGCGACTGGTCAGCATACGTAAATCACGTTc < 1:648517/90‑1 (MQ=255) gTTGATATGTCTCTTCCGGCGACAAGGACGGCGTATTATTTAATGAGCt < 2:294906/49‑1 (MQ=255) gTTGATATGTCTCTTCCGGCGACAAGGACGGCGTATTATTTAATGAGCt > 1:294906/1‑49 (MQ=255) gATATGTCTCTTCCGGCGACAAGGACGGCGTATTATTTAATGAGCTGGATGCCAGGCGACTGGTCAGCATACGTAAATCACGTTCAGCtt < 1:675953/90‑1 (MQ=255) gCGACAAGGACGGCGTATTATTTAATGAGCTGGATGCCAGGCGACTGGTCAGCATACGTAAATCACGTTCAGCTTGCTGATCAACCGCAt > 2:53047/1‑90 (MQ=255) gCGACAAGGACGGCGTATTATTTAATGAGCTGGATGCCAGGCGACTGGTCAGCATACGTAAATCACGTTCAGCTTGCTGATCAACCGCAt > 2:56328/1‑90 (MQ=255) | AACTGCTGCCATTTTTCCGCCAGACTTTGCACGGTAATTTGCTGCCACAGACGTTTCGAAAGTTGATATGTCTCTTCCGGCGACAAGAACGGCGTATTATTTAATGAGCTGGATGCCAGGCGACTGGTCAGCATACGTAAATCACGTTCAGCTTGCTGATCAACCGCAT > NZ_CP009273/1568111‑1568279 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |