Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1066822	1066830	9	2 [0]	[1] 2	rutD	pyrimidine utilization protein D

CTGCCTCCAGGCGAGGTGCGCGGGCCGCCATCCAGTCGGCGGGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGCGCCGCCGC  >  NZ_CP009273/1066732‑1066821                                                                                          | ctGCCTCCAGGCGAGGTGCGCGGGCCGCCATCCAGTCGGCGGGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGcgccgccgc  <  1:145791/90‑1 (MQ=255) ctGCCTCCAGGCGAGGTGCGCGGGCCGCCATCCAGTCGGCGGGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGcgccgccgc  <  1:251792/90‑1 (MQ=255)                                                                                          | CTGCCTCCAGGCGAGGTGCGCGGGCCGCCATCCAGTCGGCGGGATAGAGGAACAACGGCTGCGCTTCCACCCATGCCTGCGCGCCGCCGC  >  NZ_CP009273/1066732‑1066821

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑